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doi:10.2204/iodp.proc.320321.214.2013

References

Blöchl, E., Rachel, R., Burggraf, S., Hafenbradl, D., Jannasch, H.W., and Stetter, K.O., 1997. Pyrolobus fumarii, gen. and sp. nov., represents a novel group of archaea, extending the upper temperature limit for life to 113°C. Extremophiles, 1(1):14–21. http://www.ncbi.nlm.nih.gov/pubmed/9680332

Coolen, M.J.L., Cypionka, H., Sass, A.M., Sass, H., and Overmann, J., 2002. Ongoing modification of Mediterranean Pleistocene sapropels mediated by prokaryotes. Science, 296(5577):2407–2410. doi:10.1126/science.1071893

Cragg, B.A., Harvey, S.M., Fry, J.C., Herbert, R.A., and Parkes, R.J., 1992. Bacterial biomass and activity in the deep sediment layers of the Japan Sea, Hole 798B. In Pisciotto, K.A., Ingle, J.C., Jr., von Breymann, M.T., Barron, J., et al., Proc. ODP, Sci. Results, 127/128 (Pt. 1): College Station, TX (Ocean Drilling Program), 761–776. doi:10.2973/odp.proc.sr.127128.184.1992

Cragg, B.A., Law, K.M., O’Sullivan, G.M., and Parkes, R.J., 1999. Bacterial profiles in deep sediments of the Alboran Sea, western Mediterranean, Sites 976–978. In Zahn, R., Comas, M.C., and Klaus, A. (Eds.), Proc. ODP, Sci. Results, 161: College Station, TX (Ocean Drilling Program), 433–438. doi:10.2973/odp.proc.sr.161.267.1999

Cragg, B.A., Parkes, R.J., Fry, J.C., Herbert, R.A., Wimpenny, J.W.T., and Getliff, J.M., 1990. Bacterial biomass and activity profiles within deep sediment layers. In Suess, E., von Huene, R., et al., Proc. ODP, Sci. Results, 112: College Station, TX (Ocean Drilling Program), 607–619. doi:10.2973/odp.proc.sr.112.161.1990

D’Hondt, S., Jørgensen, B.B., Miller, D.J., Batzke, A., Blake, R., Cragg, B.A., Cypionka, H., Dickens, G.R., Ferdelman, T., Hinrichs, K.-U., Holm, N.G., Mitterer, R., Spivack, A., Wang, G., Bekins, B., Engelen, B., Ford, K., Gettemy, G., Rutherford, S.D., Sass, H., Skilbeck, C.G., Aiello, I.W., Guerin, G., House, C.H., Inagaki, F., Meister, P., Naehr, T., Niitsuma, S., Parkes, R.J., Schippers, A., Smith, D.C., Teske, A., Wiegel, J., Naranjo Padillo, C., and Solis Acosta, J.L., 2004. Distributions of microbial activities in deep subseafloor sediments. Science, 306(5705):2216–2221. doi:10.1126/science.1101155

D’Hondt, S., Spivack, A.J., Pockalny, R., Ferdelman, T.G., Fischer, J.P., Kallmeyer, J., Abrams, L.J., Smith, D.C., Graham, D., Hasiuk, F., Schrum, H., and Stancine, A.M., 2009. Subseafloor sedimentary life in the South Pacific Gyre. Proc. Natl. Acad. Sci. U. S. A., 106(28):11651–11656. doi:10.1073/pnas.0811793106

D’Hondt, S.L., Jørgensen, B.B., Miller, D.J., et al., 2003. Proc. ODP, Init. Repts., 201: College Station, TX (Ocean Drilling Program). doi:10.2973/odp.proc.ir.201.2003

Horsfield, B., Schenk, H.J., Zink, K., Ondrak, R., Dieckmann, V., Kallmeyer, J., Mangelsdorf, K., di Primio, R., Wilkes, H., Parkes, R.J., Fry, J., and Cragg, B., 2006. Living microbial ecosystems within the active zone of catagenesis: implications for feeding the deep biosphere. Earth Planet. Sci. Lett., 246(1–2):55–69. doi:10.1016/j.epsl.2006.03.040

Jørgensen, B.B., 2000. Bacteria and marine biogeochemistry. In Schulz, H.D., and Zabel, M. (Eds.), Marine Geochemistry: Berlin (Springer-Verlag), 173–207.

Joye, S.B., Boetius, A., Orcutt, B.N., Montoya, J.P., Schulz, H.N., Erickson, M.J., and Lugo, S.K., 2004. The anaerobic oxidation of methane and sulfate reduction in sediments from Gulf of Mexico cold seeps. Chem. Geol., 205(3–4):219–238. doi:10.1016/j.chemgeo.2003.12.019

Kallmeyer, J., 2011. Detection and quantification of microbial cells in subsurface sediments. Adv. Appl. Microbiol., 76:79–103. doi:10.1016/B978-0-12-387048-3.00003-9

Kallmeyer, J., Pockalny, R., Adhikari, R.R., Smith, D.C., and D’Hondt, S., 2012. Global distribution of microbial abundance and biomass in subseafloor sediment. Proc. Natl. Acad. Sci. U. S. A., 109(40):16213–16216. doi:10.1073/pnas.1203849109

Kallmeyer, J., Smith, D.C., Spivack, A.J., and D’Hondt, S., 2008. New cell extraction procedure applied to deep subsurface sediments. Limnol. Oceanogr.: Methods, 6:236–245. doi:10.4319/lom.2008.6.236

Kashefi, K., and Lovley, D.R., 2003. Extending the upper temperature limit for life. Science, 301(5635):934. doi:10.1126/science.1086823

Lipp, J.S., Morono, Y., Inagaki, F., and Hinrichs K.-U., 2008. Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature (London, U. K.), 454(7207):991–994. doi:10.1038/nature07174

Mangelsdorf, K., Haberer, R.M., Zink, K.-G., Dieckmann, V., Wilkes, H., and Horsfield, B., 2005. Molecular indicators for the occurrence of deep microbial communities at the JAPEX/JNOC/GSC et al. Mallik 5L-38 gas hydrate production research well. Bull. - Geol. Surv. Can., 585:1–11.

Middelburg, J.J., 1989. A simple rate model for organic matter decomposition in marine sediments. Geochim. Cosmochim. Acta, 53(7):1577–1581. doi:10.1016/0016-7037(89)90239-1

Pälike, H., Lyle, M., Nishi, H., Raffi, I., Gamage, K., Klaus, A., and the Expedition 320/321 Scientists, 2010. Proc. IODP, 320/321: Tokyo (Integrated Ocean Drilling Program Management International, Inc.). doi:10.2204/iodp.proc.320321.2010

Pälike, H., Nishi, H., Lyle, M., Raffi, I., Gamage, K., Klaus, A., and the Expedition 320/321 Scientists, 2010. Expedition 320/321 summary. In Pälike, H., Lyle, M., Nishi, H., Raffi, I., Gamage, K., Klaus, A., and the Expedition 320/321 Scientists, Proc. IODP, 320/321: Tokyo (Integrated Ocean Drilling Program Management International, Inc.). doi:10.2204/iodp.proc.320321.101.2010

Parkes, R.J., Cragg, B.A., Bale, S.J., Getliff, J.M., Goodman, K., Rochelle, P.A., Fry, J.C., Weightman, A.J., and Harvey, S.M., 1994. Deep bacterial biosphere in Pacific Ocean sediments. Nature (London, U. K.), 371(6496):410–413. doi:10.1038/371410a0

Parkes, R.J., Cragg, B.A., and Wellsbury, P., 2000. Recent studies on bacterial populations and processes in subseafloor sediments: a review. Hydrogeol. J., 8(1):11–28. doi:10.1007/PL00010971

Petsch, S.T., Eglinton, T.I., and Edwards, K.J., 2001. ¹⁴C-dead living biomass: evidence for microbial assimilation of ancient organic carbon during shale weathering. Science, 292(5519):1127–1131. doi:10.1126/science.1058332

Rothman, D.H., and Forney, D.C., 2007. Physical model for the decay and preservation of marine organic carbon. Science, 316(5829):1325–1328. doi:10.1126/science.1138211

Røy, H., Kallmeyer, J., Adhikari, R.R., Pockalny, R., Jørgensen, B.B., and D’Hondt, S., 2012. Aerobic microbial respiration in 86-million-year-old deep-sea red clay. Science, 336(6083):922–925. doi:10.1126/science.1219424

Smith, D.C., Spivack, A.J., Fisk, M.R., Haveman, S.A., Staudigel, H., and the Leg 185 Shipboard Scientific Party, 2000. Methods for quantifying potential microbial contamination during deep ocean coring. ODP Tech. Note, 28. doi:10.2973/odp.tn.28.2000

Takai, K., Nakamura, K., Toki, T., Tsunogai, U., Miyazaki, M., Miyazaki, J., Hirayama, H., Nakagawa, S., Nunoura, T., and Horikoshi, K., 2008. Cell proliferation at 122°C and isotopically heavy CH₄ production by a hyperthermophilic methanogen under high-pressure cultivation. Proc. Natl. Acad. Sci. U. S. A., 105(31):10949–10954. doi:10.1073/pnas.0712334105

Whitman, W.B., Coleman, D.C., and Wiebe, W.J., 1998. Prokaryotes: the unseen majority. Proc. Natl. Acad. Sci. U. S. A., 95(12):6578–6583. doi:10.1073/pnas.95.12.6578

Wilhelms, A., Larter, S.R., Head, I., Farrimond, P., di-Primio, R., and Zwach, C., 2001. Biodegradation of oil in uplifted basins prevented by deep-burial sterilization. Nature (London, U. K.), 411(6841):1034–1037. doi:10.1038/35082535

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